
Ever crave something but not feel like making a whole recipe? You don’t want too many leftovers, or to buy a bunch of ingredients? Maybe you’re the only one in your family that likes a certain flavor?
I am a huge fan of microwave, mug, and personal-sized ‘baked’ treats for these moments. My low-FODMAP mug cakes (like my Pumpkin Mug Cake, Chocolate Mug Cake and PB & J Mug Cake) and low-FODMAP microwave cookies are a nice way to hit that spot.
But I don’t have a ‘snickerdoodle’ recipe for the microwave. And, I have been craving an easier to make ‘snickerdoodle’ cookie for a while….(although my recipe for these baked in an oven are pretty incredible).
Voila! I made it happen 🙂

Try this low-FODMAP, gluten-free and EASY treat anytime you want a smaller version of this delicious dessert.
You may also love:
- Low-FODMAP Microwave Brownie
- Low-FODMAP Chocolate Chip Blondies
- Low-FODMAP Snickerdoodle Cinnamon Swirl Loaf
- Rachel’s Favorite Low-FODMAP Soft Snickerdoodle Cookies
- Low-FODMAP Tahini Fudge Oatmeal Bars
- Low-FODMAP Chai Spiced Oatmeal Chocolate Cookie Bars
Or check out over 550 more low-FODMAP recipes on the blog. IBS-friendly!
Be healthy and happy,
Rachel Pauls, MD

Microwave ‘Snickerdoodle’ Cookie; Low-FODMAP, Gluten-free
5 Stars 4 Stars 3 Stars 2 Stars 1 Star
5 from 2 reviews
The perfect sized treat for a gut-friendly, gluten-free craving. Low-FODMAP microwave ‘snickerdoodle’ cookies are just what you crave.
- Author: Dr. Rachel Pauls
- Prep Time: 4 minutes
- Cook Time: 1 minute
- Total Time: 5 minutes
- Yield: 2 servings 1x
- Category: Dessert
- Method: Microwave
- Cuisine: American
- Diet: Gluten Free
Ingredients
- 2 tablespoons butter*
- 2 tablespoons and 1/2 teaspoon white sugar; divided
- 1/4 teaspoon vanilla extract
- 1 teaspoon low-FODMAP milk
- Pinch of kosher salt
- 1 large egg yolk
- 4 tablespoons low-FODMAP, gluten-free flour*
- 1/4 teaspoon xanthan gum, if not added to your flour
- 1/2 teaspoon baking powder
- 3/4 teaspoon cinnamon; divided
- Optional stir-ins:
- 1 tablespoon (10g) white chocolate, cinnamon or butterscotch chips*
- 1 tablespoon toasted walnuts or pecans*
Instructions
- Stir together 1/4 teaspoon cinnamon and 1/2 teaspoon sugar, set aside for topping
- Melt butter in the microwave for about 20 seconds, then mix with all the remaining ingredients except stir-ins
- Add desired stir-ins (if using) and mix in, then sprinkle with the cinnamon/sugar mixture on top
- Cook in microwave 40-60 seconds, will continue cooking as it cools. Since microwave ovens vary, watch yours so it doesn’t overcook. If you like your low-FODMAP blondie a little undercooked, then adjust as necessary
- Serve immediately, top with low-FODMAP ice cream or whipped cream*
Notes
- Although this recipe has not been lab tested, a single serving should be low-FODMAP based on the ingredients, using available FODMAP data at time of posting
- Equipment: Microwave, large sized mug or 2 individual mugs or ramekins
- Butter is naturally low in FODMAPs due to low lactose levels
- I use Authentic Foods GF Classical Blend for best results- see my low-FODMAP bake off blog for my reasons!
- Low-FODMAP milks include lactose free, oat milk, almond milk
- 25g is one low-FODMAP serving for white chocolate chips, cinnamon chips, or butterscotch chips, due to lactose
- 30g is one low-FODMAP serving for pecans and walnuts. I recommend ‘toasting’ the nuts prior to use for best results
- Whipped cream is low-FODMAP in 1/4 cup servings


4 Responses
Exactly what i was craving!
I was craving something like this and this is exactly what I needed. Turned out a little bit more like a cake though than a cookie but very delicious
Love this, thank you so much! In a small recipe, the measurements are very precise, so it could be that there was a little extra baking powder, or your dough may have been a little lighter. I am happy you enjoyed the snickerdoodle.
Hope you stay in touch!
Best,
Rachel
Quick Question
Approximately in what size container should this recipe be cook? Can’t wait to make it!
Hi Amy,
Great question!
I like using my Le Creuset mini casserole for microwave cookies (it is 5.5 by 5.5 inches). However, these could also be made in a standard sized mug, 2 ramekins, a microwaveable bowl, or your desired dish. Be aware that the cooking time can vary, depending on your microwave and the container you use.
Best,
Rachel